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<TITLE>Dali: PF15851</TITLE><A name=s001A>
<h1>Results: PF15851</h1>
<h2>Query: <a name="s001A">s001A</a></h2>
                                                                      
<P><A NAME="summary">
Select neighbours (check boxes) for viewing as multiple structural alignment or 3D superimposition. 
The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Each neighbour has links to pairwise structural alignment with the query structure, 
 and to the PDB format coordinate file where the neighbour
is superimposed onto the query structure. 

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<h2>Summary</h2>
<PRE>
    No:  Chain   Z    rmsd lali nres  %id PDB  Description
<INPUT TYPE="CHECKBOX" NAME="cd2list" VALUE="cd2=6e7kD sequence=LLRCYTCKSLPrDERCNLTQNCSHGQTCTTLIAHGNTesgLLTTHSTWCTDSCQPITKTVEGTQVTMTCCQSSLCNVPPWQ dssp=LLEEELEEEEElLLLLLLEEELLLLLEEEEEEEEEELlllEEEEEEEEEELLLLLEEELLLLLEEEEEEELLLLLLLLLLL qstarts=3,14,21,42 sstarts=0,12,16,40 lengths=11,4,21,36 u=-0.174586,-0.981947,0.072797,-0.623664,0.167490,0.763538,-0.761947,0.087902,-0.641647 t=27,-41,-19 segments=62-72,74-77,78-98,102-137 compnd=_LIPOPROTEIN_LIPASE;>"   <A HREF=#alignment-1>1</A>:  6e7k-D 11.1  2.1   72    81   24 <A HREF="http://ekhidna2.biocenter.helsinki.fi/cgi-bin/daliviewer/readpdb.cgi?html=1&jobid=pdb&pdbid=6e7k&u=-0.174586,-0.981947,0.072797,-0.623664,0.167490,0.763538,-0.761947,0.087902,-0.641647&t=27,-41,-19">PDB</A>  MOLECULE: LIPOPROTEIN LIPASE;                                        

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<A NAME="alignments">
<h2>Pairwise Structural Alignments </h2>
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
<a name=alignment-1><h3> No 1: Query=s001A Sbjct=6e7kD Z-score=11.1</h3>

<A HREF="#s001A">back to top</A>
<PRE>
DSSP  lllLLEEEEEEEEE-LLEEeelLEEEELLLLEEEEEEEEEELL---EEEEEEEEEEELLL
Query fveGLICNSCEKSR-DSRCtmsQSRCVAKPGESCSTVSHFVGT---KHVYSKQMCSPQCK   56
ident     | |  |     | ||           |  | |      |           |   | 
Sbjct ---LLRCYTCKSLPrDERC---NLTQNCSHGQTCTTLIAHGNTesgLLTTHSTWCTDSCQ   54
DSSP  ---LLEEELEEEEElLLLL---LLEEELLLLLEEEEEEEEEELlllEEEEEEEEEELLLL


DSSP  LEEEEELLEEEEEEEELLLLLL-----
Query EKQLNTGKKLIYIMCCEKNLCN-----   78
ident               ||   |||     
Sbjct PITKTVEGTQVTMTCCQSSLCNvppwq   81
DSSP  LEEELLLLLEEEEEEELLLLLLlllll


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<H1>PF15851</H1>
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