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<TITLE>Dali: PF15025</TITLE><A name=s001A>
<h1>Results: PF15025</h1>
<h2>Query: <a name="s001A">s001A</a></h2>
                                                                      
<P><A NAME="summary">
Select neighbours (check boxes) for viewing as multiple structural alignment or 3D superimposition. 
The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Each neighbour has links to pairwise structural alignment with the query structure, 
 and to the PDB format coordinate file where the neighbour
is superimposed onto the query structure. 

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<input TYPE="hidden" NAME="query_sequence" VALUE="MILYEDDSVQVQYVDGSTLQLSPCGTEFLFEKSPPVSAHPLEQPERIRQRTHFVISTYREQLQRALDFRNSSATCPFLSETIIPSERKKHIFIDITEVRWPSLDTDGTMIYMESGIVKITSLDGHAYLCLPRSQHEFTVHFLCKVS"> 
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<h2>Summary</h2>
<PRE>
    No:  Chain   Z    rmsd lali nres  %id PDB  Description
<INPUT TYPE="CHECKBOX" NAME="cd2list" VALUE="cd2=4xb0A sequence=gsvadtvarvlrgclenmpeadcipkeqlstsfqwvtkwvdysnkygfGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEEnlmdggdlpsvtdirrprlyllqwlksdkalmmlfndgtfqvnFYHDHTKIIICSQNEEYLLTYINEDRISTTFRLTTLLMSGCSSELKNRMEYALNMLL dssp=lhhhhhhhhhhhhhhhllllllllllllllllllleeeeeeelllleeEEEELLLLEEEEELLLLEEEELLLLLEEEEELLLLLEEEEELLLLLLLLHHHHHHHHHHHHHHHHhllllllllllllllllllleeeeeeelleeeeeelllleeeeELLLLLEEEEEELLLLEEEEEELLLLLEEEEEHHHHHHHLLLHHHHHHHHHHHHHHL qstarts=0,43,129 sstarts=48,82,156 lengths=34,31,7 u=-0.162194,-0.876193,-0.453848,-0.156293,-0.431321,0.888558,-0.974303,0.215052,-0.066986 t=-41,-40,-0 segments=517-550,551-581,625-631 compnd=_SERINE/THREONINE-PROTEIN_KINASE_PLK2;>"   <A HREF=#alignment-1>1</A>:  4xb0-A  9.3  4.4   72   213   11 <A HREF="http://ekhidna2.biocenter.helsinki.fi/cgi-bin/daliviewer/readpdb.cgi?html=1&jobid=pdb&pdbid=4xb0&u=-0.162194,-0.876193,-0.453848,-0.156293,-0.431321,0.888558,-0.974303,0.215052,-0.066986&t=-41,-40,-0">PDB</A>  MOLECULE: SERINE/THREONINE-PROTEIN KINASE PLK2;                      

</form>
</PRE>
<A NAME="alignments">
<h2>Pairwise Structural Alignments </h2>
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
<a name=alignment-1><h3> No 1: Query=s001A Sbjct=4xb0A Z-score=9.3</h3>

<A HREF="#s001A">back to top</A>
<PRE>
DSSP  ------------------------------------------------LEELLLLLEEEE
Query ------------------------------------------------MILYEDDSVQVQ   12
ident                                                      |  | | 
Sbjct gsvadtvarvlrgclenmpeadcipkeqlstsfqwvtkwvdysnkygfGYQLSDHTVGVL   60
DSSP  lhhhhhhhhhhhhhhhllllllllllllllllllleeeeeeelllleeEEEELLLLEEEE


DSSP  LLLLLEEEELLLLLEEEEELLLlllllllllLLEEEEEHHHLLHHHHHHHHHHHHHHHHH
Query YVDGSTLQLSPCGTEFLFEKSPpvsahpleqPERIRQRTHFVISTYREQLQRALDFRNSS   72
ident    |    | |                                     |      |    
Sbjct FNNGAHMSLLPDKKTVHYYAEL---------GQCSVFPATDAPEQFISQVTVLKYFSHYM  111
DSSP  ELLLLEEEELLLLLEEEEELLL---------LLEEEEELLLLLLLLHHHHHHHHHHHHHH


DSSP  LLllllllllllhhhllllllllllllllllllhhheeellllleeeellllleeeeELL
Query ATcpflsetiipserkkhifiditevrwpsldtdgtmiymesgivkitsldghaylcLPR  132
ident                                                             
Sbjct EE------------nlmdggdlpsvtdirrprlyllqwlksdkalmmlfndgtfqvnFYH  159
DSSP  HH------------hllllllllllllllllllleeeeeeelleeeeeelllleeeeELL


DSSP  LLLL----------------------------------------leeeelllll
Query SQHE----------------------------------------ftvhflckvs  146
ident                                                       
Sbjct DHTKiiicsqneeylltyinedristtfrlttllmsgcsselknrmeyalnmll  213
DSSP  LLLEeeeeelllleeeeeellllleeeeehhhhhhhlllhhhhhhhhhhhhhhl


</PRE>
</PRE>
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<H1>PF15025</H1>
<TITLE>Dali logos </TITLE>
<H1>Dali logos </H1>
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