Results: PF14033
Query: s001A
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The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Each neighbour has links to pairwise structural alignment with the query structure,
and to the PDB format coordinate file where the neighbour
is superimposed onto the query structure.
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Summary
No: Chain Z rmsd lali nres %id PDB Description
1: 6n1f-A 13.0 3.1 182 206 9 PDB MOLECULE: OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY;
Pairwise Structural Alignments
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
No 1: Query=s001A Sbjct=6n1fA Z-score=13.0
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DSSP llhhhhhhhhhhhhhhllllhhhhlllhhhhhhhhhhhhhhhllllllhhhhhhhhhhhh Query rcldewltveisnsirekpdwktkykneeivtkwkreikeqcqdktkyldqiidyvfkel 60 ident Sbjct ---------------------------------------------------------tae 3 DSSP ---------------------------------------------------------lll DSSP hhhhhhHHLLllLEEL-lLLLLEEEL--LLLLHHHHHHHHHHHHHHHhhllllLLLLlll Query qwyedvEKDLntFQIG-cDYRIAYSD--GAVNETLKKSFSIGAQKLVesfgsnIDYHpgs 117 ident | | | Sbjct lhfrcnEGGXadYAAQlrEVGTVXLPayVAFDAHELARIDALQARLP------EEPV--- 54 DSSP eeelllLLLHhhHHHHhhHLLEEEELllLLLLHHHHHHHHHHHHLLL------LEEL--- DSSP lLLEEEEE-LLLLlleelllleeeelleeeelllllllllllllllhhhllllEELLlee Query hNQVIDLV-HPSLyivqydktpvlkngqleivkygeqiehakpgvdqygvskrFQWIpal 176 ident Sbjct -HDIYVRRiXVDR---------------------------------------aGERP--- 71 DSSP -LLEEEEEeEELL---------------------------------------lLLLL--- DSSP eeellllleeelllLLLLLllllHHHHHHHHHHHH-hhHHHHHHHHHhhhllllllllll Query mtknsngkfefgsyINNLHpikyKDLYDSISDIFN-aaVPGLNCVLTryasqefvripvp 235 ident Sbjct --------------QLVNL----PHSETILNLLGDarrTRFFGDXFG------------- 100 DSSP --------------EELLL----LHHHHHHHHHLLhhhHHHHHHHHL------------- DSSP lhhhhllhhhhhhhhhhhhhhhhhhhhhlllllhhhhhhhhhlhhhhlllllllllllll Query rgsdaytdeyhkereeldaildreaeetgndydwermeefekdkskylcelipaweqapv 295 ident Sbjct ------------------------------------------------------------ 100 DSSP ------------------------------------------------------------ DSSP llllLLHHhlleEEEE-EEEEEEEEllllleELLLLLLLLLLLLLLEEEEEEEEEEEElL Query fdkpIDLStfenLKVI-VKLINIELtpenpsYAGGSWHVEGGINEDIIATVLYYYDVEnI 354 ident | | | | Sbjct ----TRAE----YFIRrCQINRXLK------DSFIGXHLDAASNPDYEFSVVIQLGRA-F 145 DSSP ----LLLL----LEEEeEEEEEEEL------LLLEEEELHHHLLLLLLEEEEEELLLL-L DSSP LLLEEEEEEEllllllllllhhhhhhhhllllllllEEEEEEEELLLLLEEEEELLLEEE Query TESRLSFRTGfddpnyeqgddfytetifgikdekvmVREIGGIEAKEDRVVVFPNMFQHH 414 ident | | | | Sbjct DGGEFVVHPQ--------------------------GRPPNVFAPAYGTVIVTSCAHRHE 179 DSSP LLLLEEEELL--------------------------LLLLEEELLLLLLEEEEELLLEEE DSSP ELLEELllllllEEEEEEEEEEELLlLLLLLlllllllllhhhhlll Query VDPFELkdktkpGHRKILCFFIVDPyNHNVIstdnvppqqkewwdds 461 ident | | | | | Sbjct VRTVRA------NERTSLVYFYSRH-NGANR-------------raa 206 DSSP ELLLLL------LEEEEEEEEEELL-LLLLL-------------lll
