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The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Each neighbour has links to pairwise structural alignment with the query structure,
and to the PDB format coordinate file where the neighbour
is superimposed onto the query structure.
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Summary
No: Chain Z rmsd lali nres %id PDB Description
1: 7dxi-B 8.7 1.8 108 371 38 PDB MOLECULE: FI02838P;
Pairwise Structural Alignments
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
No 1: Query=s001A Sbjct=7dxiB Z-score=8.7
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DSSP -----------LLLL-----------LLHHHHHHHHHHHHLLLLLLEEEEELLLLLLLLL Query -----------RYRD-----------LMGLKYSLRSIKKFAPWIKNVWVVSASQYPTWFD 38 ident | ||||| | | || | | | | | | Sbjct actaidavytwVNGSdpnfiedirrfKNELRYSLRSLEKHAAWIRHVYIVTNGQIPSWLD 60 DSSP lllllleeellLLLLlhhhhhhhhhlLLLHHHLHHHHHHHLLLLLLEEEEELLLLLLLLL DSSP LLLLLEEEEEHHHHLLLHHHLLLLLHHHHHHHHHhLLLLLLLLLLLLLLLLLLLLLLLHH Query PSSDEVKFIFHEDYYSNQDDLPTFNSNSIESNFYsLPKEVSDCFIYFNDDIFFGAPVSVS 98 ident | | || | |||| | || | | | ||||| ||| Sbjct LSYERVTVVPHEVLAPDPDQLPTFSSSAIETFLH-RIPKLSKRFLYLNDDIFLGAPLYPE 119 DSSP LLLLLEEEEEHHHHLLLLLLLLLLLHHHHHHHHH-HLLLLLLEEELLLLLEELLLLLLHH DSSP HLEELLLEELL------------------------------------------------- Query DFWDSDAGQAI------------------------------------------------- 109 ident | | Sbjct DLYTEAEGVRVyqatdiyshsliatnmllnraygfkarhvlahvgflidkdiveamqrrf 179 DSSP HLLLLLLLLEEllllllhhhhhhhhhhhhhhllllllllllllllleeehhhhhhhhlll DSSP ------------------------------------------------------------ Query ------------------------------------------------------------ 109 ident Sbjct hqqildtahqrfraptdlqyafayysflmsetkvmsveeifdefdtdgsatwsdrevrtf 239 DSSP hhhhhhhhlllllllllllhhhhhllllllllllllhhhhhhlllllllllllhhhhhhh DSSP ------------------------------------------------------------ Query ------------------------------------------------------------ 109 ident Sbjct ltriyqppldwsamryfeevvqnctlptitrdlvvrcpllaealaanfavrpkynfhvsp 299 DSSP hhllllllllhhhhhhhhhhhhhlllllllhhhhhhllllhhhhhllllllllllleell DSSP ------------------------------------------------------------ Query ------------------------------------------------------------ 109 ident Sbjct krtshsnfmmltsnltevvesldrlrrnprkfncindnldanrgednemvrhlledfyls 359 DSSP llllllllllllllhhhhhhhhhhhhhllllleelllllllllllhhhhhhhhhhhhhhh DSSP ------------ Query ------------ 109 ident Sbjct ffprrskfelpp 371 DSSP hlllllllllll
