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Summary
No: Chain Z rmsd lali nres %id PDB Description
1: 7voj-A 16.3 3.3 329 400 11 PDB MOLECULE: ALUMINUM-ACTIVATED MALATE TRANSPORTER 1;
Pairwise Structural Alignments
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
No 1: Query=s001A Sbjct=7vojA Z-score=16.3
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DSSP --LHHHHHHHHLLLL---HHHHHHHHHHHHHHHHHHHHHHLHH----hhHHHLlLLLHHH Query --KIQKLWLYYFPCD---RILAKRICKSTVNTTVAFIFCLIPK----itAHLGaAPAMLP 51 ident | | | Sbjct meKVREIVREGIRVGnedPRRIIHAFKVGLALVLVSSFYYYQPfgpftdYFGI-NAMWAV 59 DSSP lhHHHHHHHHHHHHHhhlLHHHHHHHHHHHHHHHHHHHHHHLLllllllLLLL-LLHHHH DSSP HHHHHLLlLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHlhhhhllllhhhhhhhl Query MISVIVHpGRRVGGTIHGAIYCITGLIFGLAYAIFGRFLAQRClgsswhelteaqqhvlh 111 ident | | || | | || Sbjct ATVVVVF-EFSVGATLGKGLNRGVATLVAGGLGIGAHQLARLS----------------- 101 DSSP HHHHHHL-LLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------- DSSP hhHHHHHHHHHHHHHHHHHHHHHHHHHH---LHHHHHHHHHHHHHHHHHHHLLLL-LLHH Query ykRYEAGLAILAVFEVIMLFFHGWMRSV---SHYYFGIVFPLFVVVHFAFMDPLN-ETAG 167 ident | | | Sbjct --GATVEPILLVMLVFVQAALSTFVRFFpwvKTKFDYGILIFILTFALISLSGFRdEEIM 159 DSSP --LLLLHHHHHHHHHHHHHHHHHHHLLLhhhHHLLHHHHHHHHHHHHHHHLLLLLlLHHH DSSP HHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLlll Query TIAKAYSTPFYLGIAMSIFWNLVLFPEWGTTYLGNTTIDAMNELHKSIDYSINFFIAvdp 227 ident | | | | | | | Sbjct DLAESRLSTVVIGGVSCILISIFVCPVWAGQDLHSLLASNFDTLSHFLQDFGDEYFE--- 216 DSSP HHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLL--- DSSP llllllllllllLHHHHHHHHHHHHHHhHHHHHHHHH-HHHLLLLLL----LLHHHHHHH Query hnssqlysrdpvSLGKLLKMKSLISSKvNNCRVVLHE-CIYEFTYAY----VSPTKLKPI 282 ident | | | | Sbjct ------dykvveKRKKNLERYKSVLDS-KSDEEALANyAEWEPPHGQfrfrHPWKQYVAV 269 DSSP ------lhhhhhHHHHHHHHHHHHHLL-HHHHHHHHHhHLLLLLLLLllllLLHHHHHHH DSSP HHHHHHHHHHHHHHHHHHHhhHHHHhhhlllllhhhhhhhllllllhhhhllhhhHHHHH Query ISTLENLTVFINGLVNTCQleFILLarhdnklrpddvaaltlpknkeisfanaekLLKVI 342 ident | | | Sbjct GALLRQCAYRIDALNSYIN--SDFQ-----------------------------iPVDIK 298 DSSP HHHHHHHHHHHHHHHHHHH--LLLL-----------------------------lLHHHH DSSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHllllhhhllllllllllllllllllhhhlllL Query DKLHPVIYSLHRTMSECMYIAKLVLAHAfdvkvsrvhscsmfkdgnfptfsnnannlpnD 402 ident || | | Sbjct KKLETPLRRMSSESGNSMKEMSISLKQM------------------------------iK 328 DSSP HLLHHHHHHHHHHHHHHHHHHHHHHHLL------------------------------lL DSSP LLH-HHHHHHHHHHHHHHHHHHHH-HHHLLLlllllllllhhhhhllhhhhhhhhhhhhh Query VDI-QNKINDLKQALEECKAKFKS-EMLSFDrgqanttanpheyvlkekflswnassaas 460 ident | || Sbjct SSSsDIHVSNSQAACKSLSTLLKSgILNDVE----------------------------- 359 DSSP LLHhHHHHHHHHHHHHHHHHHHLLlLLLLLL----------------------------- DSSP lllllhhhhhllllllllllllllllllllllllllllllllllllllllllllllllll Query eavtgfdnfingksnpfdgtsiisegneslqstnsnesqispdstrsyepecpvayeknd 520 ident Sbjct ---------------------------------------------plqmislmttvsmli 374 DSSP ---------------------------------------------hhhhhhhhhhhhhhh DSSP llllllhhhhhlhhhhhlllllllll Query npaalnllriashkagqnadlnddde 546 ident Sbjct divnltekisesvhelasaarfknkm 400 DSSP hhhhhhhhhhhhhhhhhhhlllllll
