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The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
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Summary
No: Chain Z rmsd lali nres %id PDB Description
1: 7w72-A 42.3 1.1 465 588 93 PDB MOLECULE: PHOSPHATIDYLINOSITOL GLYCAN ANCHOR BIOSYNTHESIS C
Pairwise Structural Alignments
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
No 1: Query=s001A Sbjct=7w72A Z-score=42.3
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DSSP ------------------------------------------------------------ Query ------------------------------------------------------------ 0 ident Sbjct vrrralarlvlrlnaplcvlsyvagiawflalvfppltqrtymsenamgstmveeqfagg 60 DSSP lhhhhhhhhhhllhhhhhhhhhhhhhhhhhlllllllllllllllhhhhllllllllllh DSSP ---------------------------------------------------------LLL Query ---------------------------------------------------------SGT 3 ident ||| Sbjct drarafardfaahrkksgalpvawlertmrsvglevytqsfsrklpfpdetherymvSGT 120 DSSP hhhhhhhhhhhhhhhhlllllhhhhhhhhhhllleeeeeeeeeellllllllllleeEEE DSSP LEEEEELLLLLLLLEEEEEEEEELLLLLLHHHHHHHHHHHHHHHLLLLLLLEEEEEEEEL Query NVYGILRAPRAASTESLVLTVPCGPDTTNSQAVGLLLALAAHFRGQIYWAKDIIFLVTEH 63 ident |||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct NVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVFLVTEH 180 DSSP EEEEEELLLLLLLLEEEEEEEELLLLLLLHHHHHHHHHHHHHHLLLLLLLLEEEEEEELL DSSP LHHHHHHHHHHHHLLLLLLLLLLLLLLLLLEEEEEEEEEELLLEELEEEEELLLHHHLLL Query DLLGTEAWLEAYHDINVTGIQSSPLQGRAGAIQAAVALELSSDVVTSLDVTVEGLNGQLP 123 ident |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| Sbjct DLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGLNGQLP 240 DSSP LLHHHHHHHHHHHLLLLLLLEELLLLLLLLEEEEEELLEELLLLLLEEEEELLLHHHLLL DSSP LHHHHHHHHHHHHHLLLLEEELLEELLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLHH Query NLDLLNLFQTFCQKGGLLCTLQGKLQPQDWTSLEGPLQGLQTLLLMVLRQASGRPHGPHG 183 ident ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct NLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSLDGPLQGLQTLLLMVLRQASGRPHGSHG 300 DSSP LHHHHHHHHHHHHHHLLLEEELLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLHH DSSP HHHHHLLEEEEEEEELLLLLLLEEHHHHHHHHHHHHHHHLLLLLLLLLLLLLEEEEELLE Query LFLRYGVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFFYLLPALSR 243 ident ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct LFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLLPGLSR 360 DSSP HHHHHLLEEEEEEEELLLLLLLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL DSSP EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHlllllllllllllllllllllllllHHHH Query FVSIGLYMPATGFLLLVLGLKALELWMQLHEagvnpeeagkapgpgspplatqsvsLASL 303 ident |||||||||| |||||||||||||||||||| |||| Sbjct FVSIGLYMPAVGFLLLVLGLKALELWMQLHE-------------------------LASL 395 DSSP LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHL-------------------------LHHH DSSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHlL Query MAPLLISQAMGLALYFLPVLGQHVAAQHFPVAEAEAVVLTLLAIYVAGLALPHNTHRVvS 363 ident |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||| Sbjct VAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRV-V 454 DSSP HHHHHHHHHHHHHHHHHHHHLHHHHHHHLLLLHHHHHHHHHHHHHHHHHLLLLHHHHL-L DSSP LLL-LLLHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHLLLLLLHHHHHH Query SQV-PDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALTKPHGPRTLYAA 422 ident | ||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||| Sbjct STQaPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGPRTLYAA 514 DSSP LLLlLLLHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHLLLLLLLLLHHHH DSSP HHHHLLHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHL Query LLVVTSPAVTLFGSLFLWRELQEVPLSLAEGWQLFLTALAQGVLEHYTYGALLFPILALG 482 ident ||| |||| || ||||||||||| |||||||||||| ||||||||| |||||||| | || Sbjct LLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPLLSLG 574 DSSP HHHHLLHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHL DSSP HHHHHHHHL----- Query LYPCWLLFW----- 491 ident ||||||||| Sbjct LYPCWLLFWnvlfw 588 DSSP HHHHHHHHHhhhll
