Select neighbours (check boxes) for viewing as multiple structural alignment or 3D superimposition.
The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Each neighbour has links to pairwise structural alignment with the query structure,
and to the PDB format coordinate file where the neighbour
is superimposed onto the query structure.
Expand gaps
Summary
No: Chain Z rmsd lali nres %id PDB Description
1: 7dcm-A 27.6 0.9 165 182 99 PDB MOLECULE: PROBABLE APO-CITRATE LYASE PHOSPHORIBOSYL-DEPHOSP
Pairwise Structural Alignments
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
No 1: Query=s001A Sbjct=7dcmA Z-score=27.6
back to top
DSSP ---------------LLHHHHHHHHHHHHHHHHHHHHHLLLLEEEEEELLLLLLLLLHHH Query ---------------VSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPGPIKDSEVT 45 ident ||||||||||||||||||||||||||||||||||||||||||||| Sbjct gshxhllpelashhaVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPGPIKDSEVT 60 DSSP lllllllhhhlllllLLHHHHHHHHHHHHHHHHHHHHHLLLLEEEEEELLLLLLLLLHHH DSSP HHHHHHHHHHHHHHHHHHLLEEEEEEEELLLLLLEEEEEEELLHHHHHHHHHHHHHHLLL Query RRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPL 105 ident |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct RRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGXLSIAAPARDLKLATIELEHSHPL 120 DSSP HHHHHHHHHHHHHHHHHLLLEEEEEEEEEELLEEEEEEEEELLHHHHHHHHHHHHHHLLL DSSP HHHEEEEEELLLLLEELLHHHLLLLLLLLLLLLLHHHHHHHLLLLHHHHHHHHHHHHHHL Query GRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRMEALLNDV 165 ident |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct GRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRXEALLNDV 180 DSSP HHHEEEEEELLLLLLLLHHHHLLLLLLLLLLLLLHHHHHHLLLLLHHHHHHHHHHHHHHH DSSP -- Query -- 165 ident Sbjct da 182 DSSP ll
