AAI-profiler home
Chlamydia trachomatis SwabB4 demo
AAI of Uniprot species
Species are grouped and coloured by genus. Literature suggests > 95 % identity at the species boundary. Matched fraction is maximal in completely sequenced genomes.
Use Plotly option (at top right of plot area) to show closest data on hover and to autoscale or zoom.
AAI histograms of Uniprot species
1. Chlamydia trachomatis
Average amino acid identity = 1.000, Median amino acid identity = 1.00, Matched fraction = 0.996, Multiplicity = 1.0
Lineage: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia
2. Lactobacillus crispatus FB077-07
Average amino acid identity = 0.988, Median amino acid identity = 1.00, Matched fraction = 0.534, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
3. Lactobacillus crispatus
Average amino acid identity = 0.963, Median amino acid identity = 1.00, Matched fraction = 0.534, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
4. Lactobacillus crispatus MV-3A-US
Average amino acid identity = 0.980, Median amino acid identity = 1.00, Matched fraction = 0.465, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
5. Lactobacillus crispatus 125-2-CHN
Average amino acid identity = 0.982, Median amino acid identity = 1.00, Matched fraction = 0.430, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
6. Lactobacillus crispatus CTV-05
Average amino acid identity = 0.984, Median amino acid identity = 1.00, Matched fraction = 0.415, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
7. Lactobacillus crispatus DSM 20584 = JCM 1185
Average amino acid identity = 0.972, Median amino acid identity = 0.99, Matched fraction = 0.389, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
8. Lactobacillus crispatus (strain ST1)
Average amino acid identity = 0.970, Median amino acid identity = 0.99, Matched fraction = 0.376, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
9. Lactobacillus crispatus EM-LC1
Average amino acid identity = 0.969, Median amino acid identity = 0.99, Matched fraction = 0.340, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
10. Lactobacillus gallinarum
Average amino acid identity = 0.834, Median amino acid identity = 0.87, Matched fraction = 0.376, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
11. Lactobacillus helveticus
Average amino acid identity = 0.841, Median amino acid identity = 0.87, Matched fraction = 0.346, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
12. Lactobacillus ultunensis DSM 16047
Average amino acid identity = 0.839, Median amino acid identity = 0.87, Matched fraction = 0.342, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
13. Lactobacillus amylovorus DSM 20531
Average amino acid identity = 0.845, Median amino acid identity = 0.87, Matched fraction = 0.339, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
14. Lactobacillus amylovorus
Average amino acid identity = 0.847, Median amino acid identity = 0.88, Matched fraction = 0.337, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
15. Lactobacillus amylovorus (strain GRL 1112)
Average amino acid identity = 0.842, Median amino acid identity = 0.87, Matched fraction = 0.333, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
16. Lactobacillus kefiranofaciens
Average amino acid identity = 0.836, Median amino acid identity = 0.86, Matched fraction = 0.334, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
17. Lactobacillus amylovorus DSM 16698
Average amino acid identity = 0.845, Median amino acid identity = 0.87, Matched fraction = 0.329, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
18. Lactobacillus kitasatonis DSM 16761 = JCM 1039
Average amino acid identity = 0.845, Median amino acid identity = 0.87, Matched fraction = 0.329, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
19. Lactobacillus amylovorus (strain GRL 1118)
Average amino acid identity = 0.844, Median amino acid identity = 0.87, Matched fraction = 0.327, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
20. Lactobacillus gallinarum DSM 10532 = JCM 2011
Average amino acid identity = 0.851, Median amino acid identity = 0.88, Matched fraction = 0.323, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus