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AAI of Uniprot species
Species are grouped and coloured by genus. Literature suggests > 95 % identity at the species boundary. Matched fraction is maximal in completely sequenced genomes.
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AAI histograms of Uniprot species
1. Lactobacillus brevis (strain ATCC 367 / JCM 1170)
Average amino acid identity = 1.000, Median amino acid identity = 1.00, Matched fraction = 0.986, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
2. Lactobacillus brevis
Average amino acid identity = 0.995, Median amino acid identity = 1.00, Matched fraction = 0.969, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
3. Lactobacillus brevis KB290
Average amino acid identity = 0.992, Median amino acid identity = 1.00, Matched fraction = 0.915, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
4. Lactobacillus brevis ATCC 14869 = DSM 20054
Average amino acid identity = 0.984, Median amino acid identity = 0.99, Matched fraction = 0.907, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
5. Lactobacillus brevis BSO 464
Average amino acid identity = 0.984, Median amino acid identity = 0.99, Matched fraction = 0.885, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
6. Lactobacillus koreensis JCM 16448
Average amino acid identity = 0.825, Median amino acid identity = 0.85, Matched fraction = 0.742, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
7. Lactobacillus hammesii DSM 16381
Average amino acid identity = 0.814, Median amino acid identity = 0.83, Matched fraction = 0.736, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
8. Lactobacillus parabrevis ATCC 53295
Average amino acid identity = 0.817, Median amino acid identity = 0.84, Matched fraction = 0.716, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
9. Lactobacillus spicheri
Average amino acid identity = 0.797, Median amino acid identity = 0.82, Matched fraction = 0.703, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
10. Lactobacillus spicheri DSM 15429
Average amino acid identity = 0.794, Median amino acid identity = 0.81, Matched fraction = 0.705, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
11. Lactobacillus acidifarinae DSM 19394
Average amino acid identity = 0.789, Median amino acid identity = 0.81, Matched fraction = 0.693, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
12. Lactobacillus zymae DSM 19395
Average amino acid identity = 0.791, Median amino acid identity = 0.81, Matched fraction = 0.687, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
13. Lactobacillus senmaizukei DSM 21775 = NBRC 103853
Average amino acid identity = 0.802, Median amino acid identity = 0.82, Matched fraction = 0.675, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
14. Lactobacillus namurensis DSM 19117
Average amino acid identity = 0.792, Median amino acid identity = 0.81, Matched fraction = 0.682, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
15. Lactobacillus paucivorans
Average amino acid identity = 0.802, Median amino acid identity = 0.83, Matched fraction = 0.673, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
16. Lactobacillus zymae
Average amino acid identity = 0.798, Median amino acid identity = 0.81, Matched fraction = 0.659, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
17. Lactobacillus similis DSM 23365 = JCM 2765
Average amino acid identity = 0.681, Median amino acid identity = 0.69, Matched fraction = 0.515, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
18. Lactobacillus collinoides DSM 20515 = JCM 1123
Average amino acid identity = 0.675, Median amino acid identity = 0.68, Matched fraction = 0.501, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
19. Lactobacillus plantarum
Average amino acid identity = 0.661, Median amino acid identity = 0.67, Matched fraction = 0.511, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
20. Lactobacillus paracollinoides
Average amino acid identity = 0.685, Median amino acid identity = 0.69, Matched fraction = 0.492, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus