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AAI of Uniprot species

Species are grouped and coloured by genus. Literature suggests > 95 % identity at the species boundary. Matched fraction is maximal in completely sequenced genomes. Use Plotly option (at top right of plot area) to show closest data on hover and to autoscale or zoom.

AAI histograms of Uniprot species

1. Lactobacillus brevis (strain ATCC 367 / JCM 1170)

Average amino acid identity = 1.000, Median amino acid identity = 1.00, Matched fraction = 0.986, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

2. Lactobacillus brevis

Average amino acid identity = 0.995, Median amino acid identity = 1.00, Matched fraction = 0.969, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

3. Lactobacillus brevis KB290

Average amino acid identity = 0.992, Median amino acid identity = 1.00, Matched fraction = 0.915, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

4. Lactobacillus brevis ATCC 14869 = DSM 20054

Average amino acid identity = 0.984, Median amino acid identity = 0.99, Matched fraction = 0.907, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

5. Lactobacillus brevis BSO 464

Average amino acid identity = 0.984, Median amino acid identity = 0.99, Matched fraction = 0.885, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

6. Lactobacillus koreensis JCM 16448

Average amino acid identity = 0.825, Median amino acid identity = 0.85, Matched fraction = 0.742, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

7. Lactobacillus hammesii DSM 16381

Average amino acid identity = 0.814, Median amino acid identity = 0.83, Matched fraction = 0.736, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

8. Lactobacillus parabrevis ATCC 53295

Average amino acid identity = 0.817, Median amino acid identity = 0.84, Matched fraction = 0.716, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

9. Lactobacillus spicheri

Average amino acid identity = 0.797, Median amino acid identity = 0.82, Matched fraction = 0.703, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

10. Lactobacillus spicheri DSM 15429

Average amino acid identity = 0.794, Median amino acid identity = 0.81, Matched fraction = 0.705, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

11. Lactobacillus acidifarinae DSM 19394

Average amino acid identity = 0.789, Median amino acid identity = 0.81, Matched fraction = 0.693, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

12. Lactobacillus zymae DSM 19395

Average amino acid identity = 0.791, Median amino acid identity = 0.81, Matched fraction = 0.687, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

13. Lactobacillus senmaizukei DSM 21775 = NBRC 103853

Average amino acid identity = 0.802, Median amino acid identity = 0.82, Matched fraction = 0.675, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

14. Lactobacillus namurensis DSM 19117

Average amino acid identity = 0.792, Median amino acid identity = 0.81, Matched fraction = 0.682, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

15. Lactobacillus paucivorans

Average amino acid identity = 0.802, Median amino acid identity = 0.83, Matched fraction = 0.673, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

16. Lactobacillus zymae

Average amino acid identity = 0.798, Median amino acid identity = 0.81, Matched fraction = 0.659, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

17. Lactobacillus similis DSM 23365 = JCM 2765

Average amino acid identity = 0.681, Median amino acid identity = 0.69, Matched fraction = 0.515, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

18. Lactobacillus collinoides DSM 20515 = JCM 1123

Average amino acid identity = 0.675, Median amino acid identity = 0.68, Matched fraction = 0.501, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

19. Lactobacillus plantarum

Average amino acid identity = 0.661, Median amino acid identity = 0.67, Matched fraction = 0.511, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus

20. Lactobacillus paracollinoides

Average amino acid identity = 0.685, Median amino acid identity = 0.69, Matched fraction = 0.492, Multiplicity = 1.0
Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus